Abstract | - T-Cell Gene List

   
 
SHAW LABORATORY OF SOFTWARES
   
 
T-CELL GENE LISTS
         
       

These data below contain lists of genes uniquely expressed (fingerprint) for each T-cell type as well as subsets (naïve, activated, CD4, and CD8). T-cell fingerprints were determined using only data from the 4 T-cell types, thus these fingerprint genes may be expressed in other non T-cell lineages. A fingerprint gene is defined having a normalized (Log2) expression level >5 for a given group and <4 for all other cell types. The affymetrix probe, gene name, gene symbol, and the normalized expression value for each gene is shown in the tables.

         
       
T CD4 HTML | Excel
T CD8 HTML | Excel
T Naïve HTML | Excel
T Activated HTML | Excel
T CD4 Naïve HTML | Excel
T CD4 Activated HTML | Excel
T CD8 Naïve HTML | Excel
T CD8 Activated HTML | Excel
All Excel
         
        A pairwise comparison was performed to determine what genes are up/downregulated in T Naïve cells compared to T Activated cells. Both CD4 and CD8 replicate arrays were used in the comparison. Gene list cutoffs were set at a p-value of 0.05 and a fold change of 2 (1 in log2).
         
       
Up in T Naïve HTML | Excel
Up in T Activated HTML | Excel